Author: Dr Henry Wei. Sources checked 16 October 2026.
Choose the test that will guide treatment
I review the quality of prior endoscopy, iron treatment response and obstruction history. Capsule examines the lining; enterography assesses the bowel wall and surrounding structures; enteroscopy permits biopsy or treatment.
1. Clarify the question and previous findings
Before choosing a test, ask what we need to know: Is there ongoing or overt bleeding? Has iron deficiency persisted despite replacement? Is there weight loss, diarrhoea, inflammation or a low albumin? What did the previous gastroscopy and colonoscopy show, including preparation and completion?
The common indications for small-bowel assessment are persistent IDA or overt bleeding despite good-quality negative bidirectional endoscopy, and suspected small-bowel disease such as Crohn’s disease. Review coeliac serology while the patient is eating gluten, medicines, previous surgery and any obstruction risk; arrange renal-tract assessment when the iron-deficiency work-up indicates it.
2. Select the investigation
Discuss the case with us and we would be happy to tailor the small-bowel investigation to the clinical question, urgency and need for biopsy or treatment.
| Test | Best suited to |
|---|---|
| Capsule | Mucosal bleeding lesions or selected inflammation; no biopsy or treatment. |
| CT/MR enterography | Strictures, bowel-wall inflammation, masses and extraluminal complications. |
| Device-assisted enteroscopy | Targeted biopsy or treatment after localisation by capsule or imaging. |
| CT angiography | Acute active bleeding within hospital assessment. |
3. Assess capsule retention risk
Obstructive symptoms or known stenosis require cross-sectional imaging first. A patency capsule can assess passage when retention risk is significant and is recommended before camera capsule in established Crohn’s disease.
Ileocolonoscopy with biopsies is usually the first endoscopic test for suspected Crohn’s disease. Capsule can help when suspicion persists after inconclusive investigations.
4. Set urgency and arrange follow-up
Substantial ongoing bleeding, instability or severe symptomatic anaemia requires hospital assessment. After overt suspected small-bowel bleeding in a stable patient, discuss early capsule; ESGE recommends it as soon as possible, ideally within 48 hours.
Send bleeding dates, iron trends and response, previous reports, medicines and surgery history. Prior localisation guides oral or anal enteroscopy. Reassess recurrent bleeding, persistent IDA, weight loss or obstructive symptoms after a negative study.
Clinical pearls
- Review NSAID exposure before attributing minor capsule erosions to Crohn’s disease.
- Routine abdominal CT and dedicated enterography use different protocols.
- Confirm capsule passage before MRI; pain, distension or vomiting before passage needs urgent assessment.
Diagrams and procedure explanations
Different questions need different views
Where is the small bowel?
The small bowel starts at the stomach outlet. Its first part is the duodenum, followed by the jejunum and ileum. The end of the ileum joins the caecum, the first part of the large bowel. The loops change position, so the drawing is a simplified map.
Where is the small bowel?
The small bowel starts at the stomach outlet. Its first part is the duodenum, followed by the jejunum and ileum. The end of the ileum joins the caecum, the first part of the large bowel. The loops change position, so the drawing is a simplified map.
What do routine scopes see?
Gastroscopy examines the stomach and first part of the duodenum. Colonoscopy examines the large bowel and may include a short section of the terminal ileum when needed. Most of the small bowel lies beyond these routine views.
Capsule or a scan?
A capsule takes pictures from inside the bowel. It cannot take biopsies or treat a finding. CT or MR enterography assesses the bowel wall and surrounding structures. I choose the test for the question, and check for possible narrowing before recommending a capsule.
Reaching a selected finding
If a finding needs a biopsy or treatment, I may recommend referral for specialist enteroscopy. The team chooses a route according to where the finding is and what the earlier tests show.
Simplified illustrations, not to scale. These show an example, not your own anatomy or test result.
Read every diagram explanation
Where is the small bowel?
The small bowel starts at the stomach outlet. Its first part is the duodenum, followed by the jejunum and ileum. The end of the ileum joins the caecum, the first part of the large bowel. The loops change position, so the drawing is a simplified map.
What do routine scopes see?
Gastroscopy examines the stomach and first part of the duodenum. Colonoscopy examines the large bowel and may include a short section of the terminal ileum when needed. Most of the small bowel lies beyond these routine views.
Capsule or a scan?
A capsule takes pictures from inside the bowel. It cannot take biopsies or treat a finding. CT or MR enterography assesses the bowel wall and surrounding structures. I choose the test for the question, and check for possible narrowing before recommending a capsule.
Reaching a selected finding
If a finding needs a biopsy or treatment, I may recommend referral for specialist enteroscopy. The team chooses a route according to where the finding is and what the earlier tests show.
How the procedures work
How a capsule takes pictures
A swallowed camera records the small-bowel lining as it moves through the bowel.
Animation paused. Select a step or press Play.
Follow the preparation
Review preparation, swallowing, previous surgery and retention risk. Obstructive symptoms or known stenosis need cross-sectional imaging first. Patency testing is recommended in established Crohn’s disease and selected other patients at risk of retention.
Step 1 of 5: Follow the preparation
The whole recording may be incomplete.
Read the whole explanation without animation
Follow the preparation
Review preparation, swallowing, previous surgery and retention risk. Obstructive symptoms or known stenosis need cross-sectional imaging first. Patency testing is recommended in established Crohn’s disease and selected other patients at risk of retention.
The bowel moves the camera
The capsule travels passively with bowel motility. It cannot be steered or returned to a lesion.
Pictures show the lining
The camera records the mucosal surface. Folds, contents, rapid transit and incomplete passage during recording can limit detection.
A recorder stores the pictures
Images are transmitted to a recorder and reviewed afterwards. Findings may guide targeted enteroscopy, biopsy or enterography.
Check that it has passed
Check whether the recording reached the caecum and whether the capsule has passed. Confirm passage before MRI. Persistent symptoms or bleeding after a negative study may need further investigation.
Interpreting the capsule result
Review preparation, completeness and the clinical findings. Enterography may be needed for suspected bowel-wall or extraluminal disease, and enteroscopy for biopsy or treatment.
How balloon-assisted enteroscopy reaches further
A single balloon on the overtube helps the endoscope advance, with bowel gathered onto the sleeve to reduce loops.
Animation paused. Select a step or press Play.
The sleeve balloon holds
The single balloon on the overtube inflates to hold the bowel. There is no balloon on the endoscope tip.
Step 1 of 6: The sleeve balloon holds
Balloon systems differ. Your specialist will explain the route and technique. One examination may not reach the target or see the whole small bowel.
Read the whole explanation without animation
The sleeve balloon holds
The single balloon on the overtube inflates to hold the bowel. There is no balloon on the endoscope tip.
The camera moves forward
The endoscope advances through the overtube while the overtube balloon remains inflated.
The sleeve balloon releases
The overtube balloon deflates so the sleeve can advance over the endoscope.
The sleeve catches up
The overtube moves forward with its balloon deflated while the endoscope stays in position.
The bowel gathers onto the sleeve
The balloon inflates again. Gentle withdrawal of the endoscope and overtube together gathers bowel onto the sleeve and reduces loops.
Repeat if needed
The cycle repeats to reach the target. Prior capsule or imaging helps determine whether to approach through the mouth or colon.
Choosing the route and target
Capsule or imaging helps localise the finding and select oral or anal access. Enteroscopy can obtain tissue and treat selected lesions. The distance reached depends on anatomy and the clinical target.
Information to share with your patient
Related clinician articles
References
- bpacnz: coeliac disease investigation and management, 2022
- bpacnz: IBD, updated May 2026
- Health NZ: symptomatic lower-bowel investigations, 2026
- BSG: management of iron deficiency anaemia in adults, 2021
- AGA: GI evaluation of iron deficiency anaemia, 2020
- ESGE: capsule and device-assisted enteroscopy guideline, 2022 update
- BSG: inflammatory bowel disease guideline, 2025
- ESGE: acute lower GI bleeding guideline, 2021
- ACR/RSNA RadiologyInfo: CT enterography, reviewed June 2026
- ACR/RSNA RadiologyInfo: MR enterography
- ASGE: capsule and deep-enteroscopy quality indicators, 2022
- ASGE: understanding capsule endoscopy
